Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm28760-201ENSMUST00000185995 736 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm5186-201ENSMUST00000218781 920 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim43aQ3TL54 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Mir686-201ENSMUST00000102174 109 ntBASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm6218-201ENSMUST00000219812 628 ntBASIC13.61□□□□□ -0.23
Trim43aQ3TL54 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm15823-201ENSMUST00000064305 670 ntBASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim43aQ3TL54 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.6□□□□□ -0.23
Trim43aQ3TL54 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Gm42612-201ENSMUST00000197986 623 ntBASIC13.6□□□□□ -0.23
Trim43aQ3TL54 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Gm43170-201ENSMUST00000199827 612 ntBASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43aQ3TL54 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms