Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm12058-201ENSMUST00000118614 437 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm13570-201ENSMUST00000140763 309 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm25890-201ENSMUST00000177643 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm22614-201ENSMUST00000178300 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm26956-201ENSMUST00000182176 986 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Mir7070-201ENSMUST00000183657 86 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.87□□□□□ -0.19
Col9a2Q07643 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm22042-201ENSMUST00000082989 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm26232-201ENSMUST00000083360 166 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm24136-201ENSMUST00000083374 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm26110-201ENSMUST00000083971 165 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.87□□□□□ -0.19
Col9a2Q07643 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col9a2Q07643 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col9a2Q07643 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Gm22902-201ENSMUST00000158488 302 ntBASIC13.86□□□□□ -0.19
Col9a2Q07643 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.86□□□□□ -0.19
Col9a2Q07643 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col9a2Q07643 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.86□□□□□ -0.19
Col9a2Q07643 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col9a2Q07643 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm25668-201ENSMUST00000157700 129 ntBASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm45925-201ENSMUST00000218882 744 ntBASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col9a2Q07643 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.85□□□□□ -0.19
Col9a2Q07643 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms