Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox4Q06831 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Gm18584-201ENSMUST00000203098 964 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Gm19309-201ENSMUST00000218295 205 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.63□□□□□ -0.39
Sox4Q06831 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox4Q06831 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox4Q06831 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox4Q06831 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox4Q06831 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.62□□□□□ -0.39
Sox4Q06831 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm12502-201ENSMUST00000120197 444 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm8738-201ENSMUST00000172606 329 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox4Q06831 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm43133-201ENSMUST00000197472 463 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox4Q06831 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox4Q06831 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox4Q06831 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox4Q06831 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox4Q06831 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.62□□□□□ -0.39
Sox4Q06831 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox4Q06831 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox4Q06831 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox4Q06831 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
Sox4Q06831 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox4Q06831 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox4Q06831 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.61□□□□□ -0.39
Sox4Q06831 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox4Q06831 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox4Q06831 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox4Q06831 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.6□□□□□ -0.39
Sox4Q06831 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms