Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 Gm7029-201ENSMUST00000173226 450 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.28□□□□□ -0.6
Thbs3Q05895 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.28□□□□□ -0.6
Thbs3Q05895 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Gm27682-201ENSMUST00000183930 110 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.28□□□□□ -0.6
Thbs3Q05895 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.28□□□□□ -0.6
Thbs3Q05895 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Thbs3Q05895 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thbs3Q05895 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.28□□□□□ -0.6
Thbs3Q05895 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thbs3Q05895 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.27□□□□□ -0.6
Thbs3Q05895 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Thbs3Q05895 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.27□□□□□ -0.6
Thbs3Q05895 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thbs3Q05895 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thbs3Q05895 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.27□□□□□ -0.61
Thbs3Q05895 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Gm12384-201ENSMUST00000119228 919 ntBASIC11.27□□□□□ -0.61
Thbs3Q05895 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Gm12363-201ENSMUST00000122250 668 ntBASIC11.27□□□□□ -0.61
Thbs3Q05895 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.27□□□□□ -0.61
Thbs3Q05895 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.27□□□□□ -0.61
Thbs3Q05895 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thbs3Q05895 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Thbs3Q05895 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.26□□□□□ -0.61
Thbs3Q05895 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.26□□□□□ -0.61
Thbs3Q05895 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.26□□□□□ -0.61
Thbs3Q05895 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Gm13829-201ENSMUST00000119600 138 ntBASIC11.26□□□□□ -0.61
Thbs3Q05895 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Thbs3Q05895 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.26□□□□□ -0.61
Thbs3Q05895 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Gm43433-201ENSMUST00000196573 481 ntBASIC11.26□□□□□ -0.61
Thbs3Q05895 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thbs3Q05895 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.26□□□□□ -0.61
Thbs3Q05895 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms