Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox9Q04887 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox9Q04887 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm13035-201ENSMUST00000117496 342 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm24845-201ENSMUST00000158034 109 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm23363-201ENSMUST00000175024 79 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox9Q04887 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox9Q04887 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.23□□□□□ -0.29
Sox9Q04887 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox9Q04887 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox9Q04887 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox9Q04887 Gm14832-201ENSMUST00000121289 322 ntBASIC13.22□□□□□ -0.29
Sox9Q04887 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Sox9Q04887 Gm19187-201ENSMUST00000206781 892 ntBASIC13.22□□□□□ -0.29
Sox9Q04887 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.22□□□□□ -0.29
Sox9Q04887 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Gm25517-201ENSMUST00000083865 134 ntBASIC13.22□□□□□ -0.29
Sox9Q04887 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox9Q04887 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.22□□□□□ -0.29
Sox9Q04887 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox9Q04887 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Gm23251-201ENSMUST00000103773 110 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 Gm11941-201ENSMUST00000119904 610 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sox9Q04887 Gm37905-201ENSMUST00000195310 341 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Gm17889-201ENSMUST00000198410 598 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.21□□□□□ -0.29
Sox9Q04887 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox9Q04887 Gm1821-202ENSMUST00000227415 750 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Gm10076-201ENSMUST00000073238 384 ntBASIC13.21□□□□□ -0.29
Sox9Q04887 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox9Q04887 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sox9Q04887 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox9Q04887 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms