Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22065-201ENSMUST00000103753 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22066-201ENSMUST00000103761 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24932-201ENSMUST00000103763 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24115-201ENSMUST00000103799 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22190-201ENSMUST00000103827 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22191-201ENSMUST00000103831 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24721-201ENSMUST00000103849 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24543-201ENSMUST00000103867 82 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm28018-201ENSMUST00000103869 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm26399-201ENSMUST00000103937 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25349-201ENSMUST00000177728 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm23616-201ENSMUST00000177797 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25871-201ENSMUST00000177816 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24752-201ENSMUST00000178240 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24496-201ENSMUST00000178287 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25649-201ENSMUST00000178476 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25548-201ENSMUST00000178681 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm23147-201ENSMUST00000178841 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm26095-201ENSMUST00000179270 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22171-201ENSMUST00000179283 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm23936-201ENSMUST00000179354 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Gm22619-201ENSMUST00000179516 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25255-201ENSMUST00000179579 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24755-201ENSMUST00000179691 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm26506-201ENSMUST00000179692 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm25086-201ENSMUST00000179931 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm23243-201ENSMUST00000180047 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24659-201ENSMUST00000180212 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm24169-201ENSMUST00000180244 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm23689-201ENSMUST00000180354 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm27359-201ENSMUST00000184153 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm27785-201ENSMUST00000184268 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm27466-201ENSMUST00000184396 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm27703-201ENSMUST00000184836 110 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.72□□□□□ -0.53
Scn1bP97952 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Dupd1-202ENSMUST00000224735 548 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Scn1bP97952 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.72□□□□□ -0.53
Scn1bP97952 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Scn1bP97952 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.72□□□□□ -0.53
Scn1bP97952 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.72□□□□□ -0.53
Scn1bP97952 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Scn1bP97952 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.71□□□□□ -0.53
Scn1bP97952 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scn1bP97952 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Scn1bP97952 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scn1bP97952 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Scn1bP97952 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Mir449b-201ENSMUST00000104833 80 ntBASIC11.71□□□□□ -0.53
Scn1bP97952 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.71□□□□□ -0.53
Scn1bP97952 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.71□□□□□ -0.53
Scn1bP97952 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Scn1bP97952 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Gm5312-201ENSMUST00000203728 547 ntBASIC11.71□□□□□ -0.53
Scn1bP97952 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.71□□□□□ -0.53
Scn1bP97952 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Scn1bP97952 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Scn1bP97952 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Scn1bP97952 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.71□□□□□ -0.54
Scn1bP97952 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Scn1bP97952 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scn1bP97952 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Scn1bP97952 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scn1bP97952 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scn1bP97952 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms