Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mir686-201ENSMUST00000102174 109 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lig3P97386 Gm24255-201ENSMUST00000104481 128 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Gm5687-201ENSMUST00000118252 640 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lig3P97386 Gm26927-201ENSMUST00000182385 965 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.04□□□□□ -0.16
Lig3P97386 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.04□□□□□ -0.16
Lig3P97386 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.04□□□□□ -0.16
Lig3P97386 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lig3P97386 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lig3P97386 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lig3P97386 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Lig3P97386 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.03□□□□□ -0.16
Lig3P97386 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lig3P97386 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lig3P97386 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm13786-201ENSMUST00000122371 333 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm22902-201ENSMUST00000158488 302 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm17376-201ENSMUST00000166016 84 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm2991-201ENSMUST00000173338 480 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm25927-201ENSMUST00000175058 117 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Rps4l-202ENSMUST00000204242 789 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.03□□□□□ -0.16
Lig3P97386 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Itm2b-204ENSMUST00000228637 783 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Gm5161-201ENSMUST00000075243 853 ntBASIC14.03□□□□□ -0.16
Lig3P97386 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lig3P97386 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lig3P97386 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lig3P97386 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lig3P97386 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lig3P97386 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lig3P97386 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Lig3P97386 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lig3P97386 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.02□□□□□ -0.16
Lig3P97386 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lig3P97386 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.02□□□□□ -0.17
Lig3P97386 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.02□□□□□ -0.17
Lig3P97386 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.02□□□□□ -0.17
Lig3P97386 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.02□□□□□ -0.17
Lig3P97386 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Gm25668-201ENSMUST00000157700 129 ntBASIC14.02□□□□□ -0.17
Lig3P97386 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lig3P97386 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lig3P97386 Gm27341-201ENSMUST00000183570 106 ntBASIC14.02□□□□□ -0.17
Lig3P97386 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms