Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm43125-201ENSMUST00000201724 730 ntBASIC10.76□□□□□ -0.69
SgcaP82350 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.76□□□□□ -0.69
SgcaP82350 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SgcaP82350 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.76□□□□□ -0.69
SgcaP82350 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SgcaP82350 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.76□□□□□ -0.69
SgcaP82350 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.75□□□□□ -0.69
SgcaP82350 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
SgcaP82350 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SgcaP82350 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.75□□□□□ -0.69
SgcaP82350 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.75□□□□□ -0.69
SgcaP82350 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.75□□□□□ -0.69
SgcaP82350 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
SgcaP82350 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.75□□□□□ -0.69
SgcaP82350 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.75□□□□□ -0.69
SgcaP82350 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.75□□□□□ -0.69
SgcaP82350 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.75□□□□□ -0.69
SgcaP82350 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SgcaP82350 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SgcaP82350 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
SgcaP82350 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcaP82350 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.74□□□□□ -0.69
SgcaP82350 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.74□□□□□ -0.69
SgcaP82350 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SgcaP82350 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SgcaP82350 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.74□□□□□ -0.69
SgcaP82350 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SgcaP82350 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.74□□□□□ -0.69
SgcaP82350 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Gm46209-201ENSMUST00000217912 553 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Shd-206ENSMUST00000225145 998 ntBASIC10.74□□□□□ -0.69
SgcaP82350 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
SgcaP82350 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.74□□□□□ -0.69
SgcaP82350 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.74□□□□□ -0.69
SgcaP82350 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.74□□□□□ -0.69
SgcaP82350 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcaP82350 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms