Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Tpm2P58774 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Gm43703-201ENSMUST00000200523 763 ntBASIC14.76□□□□□ -0.05
Tpm2P58774 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.76□□□□□ -0.05
Tpm2P58774 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.76□□□□□ -0.05
Tpm2P58774 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.76□□□□□ -0.05
Tpm2P58774 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.76□□□□□ -0.05
Tpm2P58774 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.76□□□□□ -0.05
Tpm2P58774 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.76□□□□□ -0.05
Tpm2P58774 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tpm2P58774 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tpm2P58774 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tpm2P58774 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm13453-201ENSMUST00000118708 357 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm27618-201ENSMUST00000183671 60 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Gm27321-201ENSMUST00000185021 205 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tpm2P58774 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.75□□□□□ -0.05
Tpm2P58774 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tpm2P58774 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Tpm2P58774 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.74□□□□□ -0.05
Tpm2P58774 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.74□□□□□ -0.05
Tpm2P58774 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tpm2P58774 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.74□□□□□ -0.05
Tpm2P58774 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.74□□□□□ -0.05
Tpm2P58774 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tpm2P58774 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms