Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.83□□□□□ -0.36
Lim2P56563 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.83□□□□□ -0.36
Lim2P56563 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.83□□□□□ -0.36
Lim2P56563 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.83□□□□□ -0.36
Lim2P56563 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.83□□□□□ -0.36
Lim2P56563 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.83□□□□□ -0.36
Lim2P56563 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Snora73a-201ENSMUST00000082453 205 ntBASIC12.83□□□□□ -0.36
Lim2P56563 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lim2P56563 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.83□□□□□ -0.36
Lim2P56563 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lim2P56563 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Lim2P56563 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.83□□□□□ -0.36
Lim2P56563 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.83□□□□□ -0.36
Lim2P56563 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lim2P56563 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.82□□□□□ -0.36
Lim2P56563 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Lim2P56563 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Gm5187-201ENSMUST00000117317 991 ntBASIC12.82□□□□□ -0.36
Lim2P56563 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Gm25927-201ENSMUST00000175058 117 ntBASIC12.82□□□□□ -0.36
Lim2P56563 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.82□□□□□ -0.36
Lim2P56563 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.82□□□□□ -0.36
Lim2P56563 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lim2P56563 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lim2P56563 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.81□□□□□ -0.36
Lim2P56563 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lim2P56563 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Gm17420-201ENSMUST00000164753 153 ntBASIC12.81□□□□□ -0.36
Lim2P56563 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.81□□□□□ -0.36
Lim2P56563 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.81□□□□□ -0.36
Lim2P56563 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.81□□□□□ -0.36
Lim2P56563 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lim2P56563 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.81□□□□□ -0.36
Lim2P56563 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms