Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx6P54823 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx6P54823 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx6P54823 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ddx6P54823 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ddx6P54823 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ddx6P54823 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ddx6P54823 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx6P54823 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm14999-201ENSMUST00000121039 624 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Gm13570-201ENSMUST00000140763 309 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.02□□□□□ -0.33
Ddx6P54823 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Rps4l-202ENSMUST00000204242 789 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm10312-201ENSMUST00000078515 489 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.02□□□□□ -0.33
Ddx6P54823 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx6P54823 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx6P54823 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Ddx6P54823 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Gm24990-201ENSMUST00000157406 323 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Gm16505-201ENSMUST00000179981 232 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.01□□□□□ -0.33
Ddx6P54823 Mir7070-201ENSMUST00000183657 86 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Gm2260-201ENSMUST00000184965 657 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Gm44651-201ENSMUST00000207343 372 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.01□□□□□ -0.33
Ddx6P54823 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.01□□□□□ -0.33
Ddx6P54823 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx6P54823 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ddx6P54823 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx6P54823 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ddx6P54823 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Gm43823-201ENSMUST00000197391 1808 ntBASIC13□□□□□ -0.33
Ddx6P54823 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx6P54823 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Ddx6P54823 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms