Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.16■□□□□ 0.18
Msh6P54276 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Msh6P54276 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Msh6P54276 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.15■□□□□ 0.18
Msh6P54276 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.15■□□□□ 0.18
Msh6P54276 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.15■□□□□ 0.18
Msh6P54276 Gm14832-201ENSMUST00000121289 322 ntBASIC16.15■□□□□ 0.18
Msh6P54276 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.15■□□□□ 0.18
Msh6P54276 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Gm17040-202ENSMUST00000170597 889 ntBASIC16.15■□□□□ 0.18
Msh6P54276 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Gm45433-201ENSMUST00000209386 247 ntBASIC16.15■□□□□ 0.18
Msh6P54276 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.15■□□□□ 0.18
Msh6P54276 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Msh6P54276 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Msh6P54276 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Msh6P54276 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Msh6P54276 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Msh6P54276 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Msh6P54276 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Msh6P54276 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Msh6P54276 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Gm13315-201ENSMUST00000120376 991 ntBASIC16.14■□□□□ 0.17
Msh6P54276 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.14■□□□□ 0.17
Msh6P54276 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Gm45118-201ENSMUST00000208928 825 ntBASIC16.14■□□□□ 0.17
Msh6P54276 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Msh6P54276 Gzmn-202ENSMUST00000225535 989 ntBASIC16.14■□□□□ 0.17
Msh6P54276 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Msh6P54276 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Msh6P54276 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Msh6P54276 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Msh6P54276 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.13■□□□□ 0.17
Msh6P54276 Gm12015-201ENSMUST00000117065 843 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Gm6963-201ENSMUST00000147879 379 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.13■□□□□ 0.17
Msh6P54276 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.13■□□□□ 0.17
Msh6P54276 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.13■□□□□ 0.17
Msh6P54276 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Msh6P54276 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms