Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox1P53783 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Mir181d-201ENSMUST00000102383 72 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Gm13549-201ENSMUST00000118339 796 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Gm5257-201ENSMUST00000121823 790 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox1P53783 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Sox1P53783 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox1P53783 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Gm27910-201ENSMUST00000185004 107 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Gm10774-201ENSMUST00000188689 204 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Gm44329-201ENSMUST00000197469 112 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.06□□□□□ -0.32
Sox1P53783 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox1P53783 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox1P53783 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox1P53783 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox1P53783 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox1P53783 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm1848-201ENSMUST00000120711 789 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm14585-201ENSMUST00000120713 634 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm12516-201ENSMUST00000120819 385 ntBASIC13.05□□□□□ -0.32
Sox1P53783 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Sox1P53783 Gm4482-201ENSMUST00000200876 742 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm5298-201ENSMUST00000201122 892 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm18463-201ENSMUST00000207258 474 ntBASIC13.05□□□□□ -0.32
Sox1P53783 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.05□□□□□ -0.32
Sox1P53783 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox1P53783 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.05□□□□□ -0.32
Sox1P53783 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.05□□□□□ -0.32
Sox1P53783 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox1P53783 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sox1P53783 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms