Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2e3P52483 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube2e3P52483 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ube2e3P52483 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ube2e3P52483 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube2e3P52483 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Ube2e3P52483 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm4984-201ENSMUST00000115987 360 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm11424-201ENSMUST00000121929 829 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm22121-201ENSMUST00000175148 54 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.3□□□□□ -0.44
Ube2e3P52483 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube2e3P52483 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube2e3P52483 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube2e3P52483 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ube2e3P52483 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm7063-201ENSMUST00000186840 981 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube2e3P52483 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Gm19163-201ENSMUST00000223313 780 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ube2e3P52483 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.29□□□□□ -0.44
Ube2e3P52483 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube2e3P52483 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms