Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ClgnP52194 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.12□□□□□ -0.31
ClgnP52194 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.12□□□□□ -0.31
ClgnP52194 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClgnP52194 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.12□□□□□ -0.31
ClgnP52194 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ClgnP52194 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.11□□□□□ -0.31
ClgnP52194 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Gm6447-201ENSMUST00000118905 835 ntBASIC13.11□□□□□ -0.31
ClgnP52194 Gm13612-201ENSMUST00000119276 390 ntBASIC13.11□□□□□ -0.31
ClgnP52194 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.11□□□□□ -0.31
ClgnP52194 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.11□□□□□ -0.31
ClgnP52194 Gm6745-201ENSMUST00000199216 526 ntBASIC13.11□□□□□ -0.31
ClgnP52194 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.11□□□□□ -0.31
ClgnP52194 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.11□□□□□ -0.31
ClgnP52194 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.11□□□□□ -0.31
ClgnP52194 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ClgnP52194 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClgnP52194 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClgnP52194 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.1□□□□□ -0.31
ClgnP52194 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.1□□□□□ -0.31
ClgnP52194 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ClgnP52194 Gm14928-201ENSMUST00000120198 477 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Gm15806-201ENSMUST00000120696 955 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Mir1894-201ENSMUST00000122802 81 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.1□□□□□ -0.31
ClgnP52194 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Gm23984-201ENSMUST00000157139 203 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.1□□□□□ -0.31
ClgnP52194 Gm45384-201ENSMUST00000210451 277 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ClgnP52194 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.1□□□□□ -0.31
ClgnP52194 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms