Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.34□□□□□ -0.43
Prox1P48437 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.34□□□□□ -0.43
Prox1P48437 Gm9063-201ENSMUST00000223299 582 ntBASIC12.34□□□□□ -0.43
Prox1P48437 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.34□□□□□ -0.43
Prox1P48437 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.34□□□□□ -0.43
Prox1P48437 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Prox1P48437 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Prox1P48437 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Prox1P48437 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.34□□□□□ -0.43
Prox1P48437 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Prox1P48437 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.34□□□□□ -0.43
Prox1P48437 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Prox1P48437 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prox1P48437 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prox1P48437 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Prox1P48437 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prox1P48437 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Prox1P48437 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.33□□□□□ -0.43
Prox1P48437 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Prox1P48437 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Prox1P48437 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Prox1P48437 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm12403-201ENSMUST00000121384 959 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.33□□□□□ -0.44
Prox1P48437 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm27437-201ENSMUST00000183429 107 ntBASIC12.33□□□□□ -0.44
Prox1P48437 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Prox1P48437 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.33□□□□□ -0.44
Prox1P48437 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Prox1P48437 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Prox1P48437 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Prox1P48437 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Prox1P48437 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Prox1P48437 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Prox1P48437 Gm12485-201ENSMUST00000119641 291 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Prox1P48437 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.32□□□□□ -0.44
Prox1P48437 Gm38144-201ENSMUST00000192790 465 ntBASIC12.32□□□□□ -0.44
Prox1P48437 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.32□□□□□ -0.44
Prox1P48437 Gm19931-201ENSMUST00000198920 368 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms