Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 Mir6420-201ENSMUST00000185032 102 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm43630-201ENSMUST00000201550 776 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Vps4bP46467 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Vps4bP46467 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Vps4bP46467 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.03□□□□□ -0.32
Vps4bP46467 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps4bP46467 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Vps4bP46467 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Vps4bP46467 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps4bP46467 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vps4bP46467 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Vps4bP46467 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Gm4984-201ENSMUST00000115987 360 ntBASIC13.02□□□□□ -0.33
Vps4bP46467 Gm12928-201ENSMUST00000117115 573 ntBASIC13.02□□□□□ -0.33
Vps4bP46467 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.02□□□□□ -0.33
Vps4bP46467 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Vps4bP46467 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps4bP46467 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vps4bP46467 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps4bP46467 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4bP46467 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps4bP46467 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.02□□□□□ -0.33
Vps4bP46467 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4bP46467 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vps4bP46467 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vps4bP46467 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Gm13813-201ENSMUST00000120998 787 ntBASIC13.01□□□□□ -0.33
Vps4bP46467 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps4bP46467 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.01□□□□□ -0.33
Vps4bP46467 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.01□□□□□ -0.33
Vps4bP46467 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps4bP46467 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4bP46467 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms