Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-2P42586 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.75□□□□□ -0.53
Nkx2-2P42586 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Gm27731-201ENSMUST00000185192 107 ntBASIC11.75□□□□□ -0.53
Nkx2-2P42586 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.75□□□□□ -0.53
Nkx2-2P42586 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Gm38092-201ENSMUST00000195600 653 ntBASIC11.75□□□□□ -0.53
Nkx2-2P42586 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-2P42586 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm13226-201ENSMUST00000117838 404 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm15824-201ENSMUST00000119516 955 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm13829-201ENSMUST00000119600 138 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm14660-201ENSMUST00000119809 575 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm45784-201ENSMUST00000188360 142 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm24526-201ENSMUST00000082921 158 ntBASIC11.74□□□□□ -0.53
Nkx2-2P42586 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx2-2P42586 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms