Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl12P40224 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl12P40224 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cxcl12P40224 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm9132-201ENSMUST00000210182 832 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Ginm1-202ENSMUST00000065124 300 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.13□□□□□ -0.31
Cxcl12P40224 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl12P40224 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl12P40224 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm13047-201ENSMUST00000117116 815 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cxcl12P40224 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm4482-201ENSMUST00000200876 742 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm45398-201ENSMUST00000210561 165 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm17827-201ENSMUST00000211825 742 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm270-201ENSMUST00000223010 976 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.12□□□□□ -0.31
Cxcl12P40224 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.12□□□□□ -0.31
Cxcl12P40224 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl12P40224 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms