Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Gm18711-201ENSMUST00000199341 750 ntBASIC18.77■□□□□ 0.59
Chd1P40201 Gm44711-201ENSMUST00000205414 1264 ntBASIC18.77■□□□□ 0.59
Chd1P40201 Gm44506-201ENSMUST00000206278 965 ntBASIC18.77■□□□□ 0.59
Chd1P40201 Gm17931-201ENSMUST00000208132 634 ntBASIC18.77■□□□□ 0.59
Chd1P40201 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC18.77■□□□□ 0.59
Chd1P40201 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Chd1P40201 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd1P40201 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.76■□□□□ 0.59
Chd1P40201 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC18.76■□□□□ 0.59
Chd1P40201 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.76■□□□□ 0.59
Chd1P40201 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chd1P40201 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1P40201 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Gm43677-201ENSMUST00000198098 2378 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chd1P40201 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chd1P40201 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Gm25053-201ENSMUST00000103982 133 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm25922-201ENSMUST00000104281 130 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm9166-201ENSMUST00000120293 561 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm22146-201ENSMUST00000157397 288 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm24679-201ENSMUST00000158762 111 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Chd1P40201 Gm25053-202ENSMUST00000199731 132 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chd1P40201 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Chd1P40201 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Chd1P40201 Olfr692-202ENSMUST00000217827 1126 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chd1P40201 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Gm5380-201ENSMUST00000119296 2136 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chd1P40201 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1P40201 Gm6170-201ENSMUST00000187672 1388 ntBASIC18.75■□□□□ 0.59
Chd1P40201 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chd1P40201 Gm11502-201ENSMUST00000120917 1211 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Chd1P40201 Gm42511-201ENSMUST00000196160 234 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chd1P40201 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 AC166836.1-201ENSMUST00000219933 1795 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chd1P40201 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chd1P40201 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Chd1P40201 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.74■□□□□ 0.59
Chd1P40201 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Gm12179-201ENSMUST00000118344 1272 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC18.74■□□□□ 0.59
Chd1P40201 Gm7719-201ENSMUST00000182374 975 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Gm9136-201ENSMUST00000193368 454 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Gm8574-201ENSMUST00000203207 924 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Gm43807-201ENSMUST00000200678 1781 ntBASIC18.74■□□□□ 0.59
Chd1P40201 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chd1P40201 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1P40201 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms