Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm8566-201ENSMUST00000120174 465 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.83□□□□□ -0.52
Sftpa1P35242 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.83□□□□□ -0.52
Sftpa1P35242 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.83□□□□□ -0.52
Sftpa1P35242 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.83□□□□□ -0.52
Sftpa1P35242 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sftpa1P35242 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm6963-201ENSMUST00000147879 379 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm37666-201ENSMUST00000194110 866 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm17812-201ENSMUST00000204935 318 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm7848-201ENSMUST00000210739 718 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm18730-201ENSMUST00000218038 343 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sftpa1P35242 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.82□□□□□ -0.52
Sftpa1P35242 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sftpa1P35242 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms