Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.35□□□□□ -0.11
Nedd1P33215 Gm14726-201ENSMUST00000120623 896 ntBASIC14.35□□□□□ -0.11
Nedd1P33215 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.35□□□□□ -0.11
Nedd1P33215 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.35□□□□□ -0.11
Nedd1P33215 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.35□□□□□ -0.11
Nedd1P33215 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Nedd1P33215 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd1P33215 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd1P33215 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.35□□□□□ -0.11
Nedd1P33215 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nedd1P33215 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Gm13315-201ENSMUST00000120376 991 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.34□□□□□ -0.11
Nedd1P33215 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Nedd1P33215 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Nedd1P33215 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.34□□□□□ -0.11
Nedd1P33215 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Nedd1P33215 Gm37259-201ENSMUST00000193903 849 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd1P33215 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.34□□□□□ -0.11
Nedd1P33215 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.34□□□□□ -0.11
Nedd1P33215 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nedd1P33215 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd1P33215 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd1P33215 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd1P33215 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd1P33215 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd1P33215 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.33□□□□□ -0.11
Nedd1P33215 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd1P33215 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nedd1P33215 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.33□□□□□ -0.12
Nedd1P33215 Gm13350-201ENSMUST00000120519 479 ntBASIC14.33□□□□□ -0.12
Nedd1P33215 Gm11597-201ENSMUST00000121423 964 ntBASIC14.33□□□□□ -0.12
Nedd1P33215 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Gm7584-201ENSMUST00000175829 940 ntBASIC14.33□□□□□ -0.12
Nedd1P33215 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nedd1P33215 Gm30285-201ENSMUST00000214614 422 ntBASIC14.33□□□□□ -0.12
Nedd1P33215 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.33□□□□□ -0.12
Nedd1P33215 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nedd1P33215 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nedd1P33215 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nedd1P33215 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nedd1P33215 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.32□□□□□ -0.12
Nedd1P33215 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Nedd1P33215 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nedd1P33215 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.32□□□□□ -0.12
Nedd1P33215 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Gm25214-201ENSMUST00000104573 129 ntBASIC14.32□□□□□ -0.12
Nedd1P33215 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nedd1P33215 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nedd1P33215 Gm26956-201ENSMUST00000182176 986 ntBASIC14.32□□□□□ -0.12
Nedd1P33215 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms