Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc11P31313 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hoxc11P31313 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hoxc11P31313 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.45□□□□□ -0.42
Hoxc11P31313 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm12241-201ENSMUST00000118330 726 ntBASIC12.45□□□□□ -0.42
Hoxc11P31313 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm44364-201ENSMUST00000198368 141 ntBASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.45□□□□□ -0.42
Hoxc11P31313 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm9368-201ENSMUST00000219348 831 ntBASIC12.45□□□□□ -0.42
Hoxc11P31313 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.45□□□□□ -0.42
Hoxc11P31313 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hoxc11P31313 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hoxc11P31313 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm6023-201ENSMUST00000118217 606 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm12363-201ENSMUST00000122250 668 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm7809-201ENSMUST00000153199 742 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm7783-201ENSMUST00000204795 781 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.44□□□□□ -0.42
Hoxc11P31313 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.44□□□□□ -0.42
Hoxc11P31313 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.44□□□□□ -0.42
Hoxc11P31313 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hoxc11P31313 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxc11P31313 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.43□□□□□ -0.42
Hoxc11P31313 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxc11P31313 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.43□□□□□ -0.42
Hoxc11P31313 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc11P31313 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc11P31313 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc11P31313 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms