Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.69□□□□□ -0.06
Vcam1P29533 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.69□□□□□ -0.06
Vcam1P29533 Gm25732-201ENSMUST00000175168 60 ntBASIC14.69□□□□□ -0.06
Vcam1P29533 Gm5070-201ENSMUST00000177599 862 ntBASIC14.69□□□□□ -0.06
Vcam1P29533 Gm7003-201ENSMUST00000195089 312 ntBASIC14.69□□□□□ -0.06
Vcam1P29533 Gm18753-201ENSMUST00000201000 566 ntBASIC14.69□□□□□ -0.06
Vcam1P29533 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.69□□□□□ -0.06
Vcam1P29533 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Vcam1P29533 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Vcam1P29533 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vcam1P29533 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Vcam1P29533 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcam1P29533 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Rmrp-201ENSMUST00000157463 271 ntBASIC14.68□□□□□ -0.06
Vcam1P29533 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vcam1P29533 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.68□□□□□ -0.06
Vcam1P29533 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.68□□□□□ -0.06
Vcam1P29533 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.68□□□□□ -0.06
Vcam1P29533 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vcam1P29533 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcam1P29533 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vcam1P29533 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.67□□□□□ -0.06
Vcam1P29533 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.67□□□□□ -0.06
Vcam1P29533 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vcam1P29533 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm13296-201ENSMUST00000117854 997 ntBASIC14.67□□□□□ -0.06
Vcam1P29533 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.67□□□□□ -0.06
Vcam1P29533 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.67□□□□□ -0.06
Vcam1P29533 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm8385-201ENSMUST00000058999 643 ntBASIC14.67□□□□□ -0.06
Vcam1P29533 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.67□□□□□ -0.06
Vcam1P29533 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.67□□□□□ -0.06
Vcam1P29533 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcam1P29533 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vcam1P29533 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.66□□□□□ -0.06
Vcam1P29533 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.66□□□□□ -0.06
Vcam1P29533 Gm23200-201ENSMUST00000104379 132 ntBASIC14.66□□□□□ -0.06
Vcam1P29533 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.66□□□□□ -0.06
Vcam1P29533 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.66□□□□□ -0.06
Vcam1P29533 Mir6927-201ENSMUST00000184494 71 ntBASIC14.66□□□□□ -0.06
Vcam1P29533 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.66□□□□□ -0.06
Vcam1P29533 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.66□□□□□ -0.06
Vcam1P29533 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vcam1P29533 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcam1P29533 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms