Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
H2afxP27661 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Gm14140-201ENSMUST00000119999 995 ntBASIC13.36□□□□□ -0.27
H2afxP27661 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.36□□□□□ -0.27
H2afxP27661 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.36□□□□□ -0.27
H2afxP27661 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afxP27661 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.36□□□□□ -0.27
H2afxP27661 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.36□□□□□ -0.27
H2afxP27661 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afxP27661 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.36□□□□□ -0.27
H2afxP27661 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.36□□□□□ -0.27
H2afxP27661 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
H2afxP27661 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afxP27661 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.35□□□□□ -0.27
H2afxP27661 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.35□□□□□ -0.27
H2afxP27661 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afxP27661 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.35□□□□□ -0.27
H2afxP27661 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afxP27661 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afxP27661 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H2afxP27661 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.35□□□□□ -0.27
H2afxP27661 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H2afxP27661 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H2afxP27661 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afxP27661 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.34□□□□□ -0.27
H2afxP27661 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
H2afxP27661 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Mir686-201ENSMUST00000102174 109 ntBASIC13.34□□□□□ -0.27
H2afxP27661 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.34□□□□□ -0.27
H2afxP27661 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.34□□□□□ -0.27
H2afxP27661 Gm14760-201ENSMUST00000121831 999 ntBASIC13.34□□□□□ -0.27
H2afxP27661 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afxP27661 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
H2afxP27661 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H2afxP27661 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afxP27661 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms