Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm43818-201ENSMUST00000200605 466 ntBASIC11.88□□□□□ -0.51
Cd40lgP27548 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cd40lgP27548 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.88□□□□□ -0.51
Cd40lgP27548 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd40lgP27548 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm11425-201ENSMUST00000119608 498 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm24196-201ENSMUST00000179161 110 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm9396-201ENSMUST00000076703 567 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm10012-201ENSMUST00000078252 192 ntBASIC11.87□□□□□ -0.51
Cd40lgP27548 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd40lgP27548 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd40lgP27548 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm6447-201ENSMUST00000118905 835 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm11803-201ENSMUST00000119966 444 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm10156-201ENSMUST00000122364 462 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.86□□□□□ -0.51
Cd40lgP27548 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms