Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.05□□□□□ -0.48
Clk1P22518 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clk1P22518 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clk1P22518 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clk1P22518 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clk1P22518 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clk1P22518 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Gm12928-201ENSMUST00000117115 573 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Gm9002-201ENSMUST00000178437 499 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Gm29608-201ENSMUST00000190444 463 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clk1P22518 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.04□□□□□ -0.48
Clk1P22518 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Gm16372-201ENSMUST00000073088 450 ntBASIC12.04□□□□□ -0.48
Clk1P22518 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clk1P22518 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clk1P22518 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.04□□□□□ -0.48
Clk1P22518 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clk1P22518 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clk1P22518 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Clk1P22518 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Gm14928-201ENSMUST00000120198 477 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Gm11918-201ENSMUST00000121660 179 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Gm6152-201ENSMUST00000151704 340 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Gm19931-201ENSMUST00000198920 368 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Clk1P22518 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.03□□□□□ -0.48
Clk1P22518 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clk1P22518 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clk1P22518 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clk1P22518 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clk1P22518 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms