Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.1□□□□□ -0.47
TP20293 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.1□□□□□ -0.47
TP20293 Gm19931-201ENSMUST00000198920 368 ntBASIC12.1□□□□□ -0.47
TP20293 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.1□□□□□ -0.47
TP20293 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
TP20293 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TP20293 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.1□□□□□ -0.47
TP20293 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.1□□□□□ -0.47
TP20293 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TP20293 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.09□□□□□ -0.47
TP20293 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.09□□□□□ -0.47
TP20293 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.09□□□□□ -0.47
TP20293 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Gm11618-201ENSMUST00000117946 267 ntBASIC12.09□□□□□ -0.47
TP20293 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Gm8810-201ENSMUST00000172895 754 ntBASIC12.09□□□□□ -0.47
TP20293 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.09□□□□□ -0.47
TP20293 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.09□□□□□ -0.47
TP20293 Gm7561-201ENSMUST00000211203 886 ntBASIC12.09□□□□□ -0.47
TP20293 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.09□□□□□ -0.47
TP20293 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TP20293 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TP20293 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
TP20293 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.08□□□□□ -0.47
TP20293 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TP20293 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TP20293 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.08□□□□□ -0.48
TP20293 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.08□□□□□ -0.48
TP20293 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.08□□□□□ -0.48
TP20293 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.08□□□□□ -0.48
TP20293 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.08□□□□□ -0.48
TP20293 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Gm27847-201ENSMUST00000183711 107 ntBASIC12.08□□□□□ -0.48
TP20293 Gm27375-201ENSMUST00000183799 107 ntBASIC12.08□□□□□ -0.48
TP20293 Gm27839-201ENSMUST00000184242 106 ntBASIC12.08□□□□□ -0.48
TP20293 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.08□□□□□ -0.48
TP20293 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.08□□□□□ -0.48
TP20293 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.08□□□□□ -0.48
TP20293 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TP20293 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TP20293 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TP20293 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.08□□□□□ -0.48
TP20293 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
TP20293 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms