Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.48□□□□□ -0.73
Sdc1P18828 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.48□□□□□ -0.73
Sdc1P18828 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.48□□□□□ -0.73
Sdc1P18828 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Gm33320-201ENSMUST00000192232 530 ntBASIC10.48□□□□□ -0.73
Sdc1P18828 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.48□□□□□ -0.73
Sdc1P18828 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.48□□□□□ -0.73
Sdc1P18828 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.48□□□□□ -0.73
Sdc1P18828 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sdc1P18828 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sdc1P18828 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sdc1P18828 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sdc1P18828 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.47□□□□□ -0.73
Sdc1P18828 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.47□□□□□ -0.73
Sdc1P18828 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.47□□□□□ -0.73
Sdc1P18828 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.47□□□□□ -0.73
Sdc1P18828 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sdc1P18828 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sdc1P18828 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.47□□□□□ -0.73
Sdc1P18828 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.47□□□□□ -0.73
Sdc1P18828 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sdc1P18828 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sdc1P18828 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.47□□□□□ -0.73
Sdc1P18828 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
Sdc1P18828 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.46□□□□□ -0.73
Sdc1P18828 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.46□□□□□ -0.73
Sdc1P18828 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sdc1P18828 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sdc1P18828 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.46□□□□□ -0.73
Sdc1P18828 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sdc1P18828 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms