Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.61□□□□□ -0.71
Cxcl1P12850 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm14350-201ENSMUST00000116642 640 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm16202-201ENSMUST00000117532 544 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm24694-201ENSMUST00000180054 110 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm27663-201ENSMUST00000184839 110 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.61□□□□□ -0.71
Cxcl1P12850 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm26035-201ENSMUST00000083065 308 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cxcl1P12850 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cxcl1P12850 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.61□□□□□ -0.71
Cxcl1P12850 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.6□□□□□ -0.71
Cxcl1P12850 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm12291-201ENSMUST00000121627 311 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm44069-201ENSMUST00000204898 506 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.6□□□□□ -0.71
Cxcl1P12850 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cxcl1P12850 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cxcl1P12850 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Cxcl1P12850 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cxcl1P12850 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms