Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Gm5745-201ENSMUST00000183748 313 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.17□□□□□ -0.62
PtcraP0C6B2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PtcraP0C6B2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm1335-201ENSMUST00000121653 386 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm12363-201ENSMUST00000122250 668 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm18187-201ENSMUST00000196476 984 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm32025-201ENSMUST00000217960 307 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.16□□□□□ -0.62
PtcraP0C6B2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms