Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ApoeP08226 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
ApoeP08226 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.15□□□□□ -0.46
ApoeP08226 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ApoeP08226 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
ApoeP08226 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
ApoeP08226 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
ApoeP08226 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ApoeP08226 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.14□□□□□ -0.47
ApoeP08226 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.14□□□□□ -0.47
ApoeP08226 Gm17837-201ENSMUST00000186435 985 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.14□□□□□ -0.47
ApoeP08226 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Gm42550-201ENSMUST00000201553 960 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.14□□□□□ -0.47
ApoeP08226 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Gm8396-201ENSMUST00000057361 823 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ApoeP08226 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
ApoeP08226 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.14□□□□□ -0.47
ApoeP08226 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ApoeP08226 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ApoeP08226 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.14□□□□□ -0.47
ApoeP08226 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
ApoeP08226 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ApoeP08226 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.13□□□□□ -0.47
ApoeP08226 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.13□□□□□ -0.47
ApoeP08226 Gm27390-201ENSMUST00000184516 176 ntBASIC12.13□□□□□ -0.47
ApoeP08226 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.13□□□□□ -0.47
ApoeP08226 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.13□□□□□ -0.47
ApoeP08226 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ApoeP08226 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ApoeP08226 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.13□□□□□ -0.47
ApoeP08226 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ApoeP08226 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms