Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.75□□□□□ -0.53
P01852 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
P01852 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.75□□□□□ -0.53
P01852 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.75□□□□□ -0.53
P01852 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.75□□□□□ -0.53
P01852 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.75□□□□□ -0.53
P01852 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P01852 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.75□□□□□ -0.53
P01852 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01852 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
P01852 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P01852 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.74□□□□□ -0.53
P01852 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Gm12742-201ENSMUST00000117326 410 ntBASIC11.74□□□□□ -0.53
P01852 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.74□□□□□ -0.53
P01852 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.74□□□□□ -0.53
P01852 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P01852 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.74□□□□□ -0.53
P01852 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.74□□□□□ -0.53
P01852 Gm5370-201ENSMUST00000187187 574 ntBASIC11.74□□□□□ -0.53
P01852 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.74□□□□□ -0.53
P01852 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.74□□□□□ -0.53
P01852 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P01852 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.74□□□□□ -0.53
P01852 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.74□□□□□ -0.53
P01852 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01852 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
P01852 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.73□□□□□ -0.53
P01852 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P01852 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P01852 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.73□□□□□ -0.53
P01852 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.73□□□□□ -0.53
P01852 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.73□□□□□ -0.53
P01852 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Gm27514-201ENSMUST00000183692 110 ntBASIC11.73□□□□□ -0.53
P01852 Gm37042-201ENSMUST00000193816 581 ntBASIC11.73□□□□□ -0.53
P01852 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Gm4768-201ENSMUST00000206199 686 ntBASIC11.73□□□□□ -0.53
P01852 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.73□□□□□ -0.53
P01852 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.73□□□□□ -0.53
P01852 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.73□□□□□ -0.53
P01852 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.73□□□□□ -0.53
P01852 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.73□□□□□ -0.53
P01852 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.73□□□□□ -0.53
P01852 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P01852 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P01852 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01852 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.73□□□□□ -0.53
P01852 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.72□□□□□ -0.53
P01852 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01852 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms