Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Gm12176-201ENSMUST00000121420 875 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Mir5132-201ENSMUST00000175166 71 ntBASIC13.36□□□□□ -0.27
Ttc3O88196 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ttc3O88196 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ttc3O88196 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ttc3O88196 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ttc3O88196 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Gm11930-201ENSMUST00000117788 190 ntBASIC13.35□□□□□ -0.27
Ttc3O88196 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.35□□□□□ -0.27
Ttc3O88196 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.35□□□□□ -0.27
Ttc3O88196 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.35□□□□□ -0.27
Ttc3O88196 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.35□□□□□ -0.27
Ttc3O88196 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.35□□□□□ -0.27
Ttc3O88196 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.35□□□□□ -0.27
Ttc3O88196 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ttc3O88196 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm43138-201ENSMUST00000199123 708 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Gzmn-202ENSMUST00000225535 989 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm10076-201ENSMUST00000073238 384 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ttc3O88196 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ttc3O88196 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm12380-201ENSMUST00000119012 544 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.34□□□□□ -0.27
Ttc3O88196 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm7003-201ENSMUST00000195089 312 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ttc3O88196 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ttc3O88196 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.34□□□□□ -0.27
Ttc3O88196 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms