Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Limk2O54785 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limk2O54785 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Limk2O54785 Gm26083-201ENSMUST00000157904 193 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Gm16379-201ENSMUST00000161469 348 ntBASIC13.02□□□□□ -0.33
Limk2O54785 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.02□□□□□ -0.33
Limk2O54785 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Limk2O54785 Gm29396-201ENSMUST00000185659 716 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Gm8762-201ENSMUST00000193486 339 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.02□□□□□ -0.33
Limk2O54785 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.02□□□□□ -0.33
Limk2O54785 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Limk2O54785 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Mir339-201ENSMUST00000083659 96 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Limk2O54785 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.02□□□□□ -0.33
Limk2O54785 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Limk2O54785 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limk2O54785 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Gm25261-201ENSMUST00000157416 134 ntBASIC13.01□□□□□ -0.33
Limk2O54785 Gm16570-201ENSMUST00000161951 436 ntBASIC13.01□□□□□ -0.33
Limk2O54785 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.01□□□□□ -0.33
Limk2O54785 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.01□□□□□ -0.33
Limk2O54785 Cts7-204ENSMUST00000225321 1257 ntBASIC13.01□□□□□ -0.33
Limk2O54785 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limk2O54785 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Limk2O54785 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13□□□□□ -0.33
Limk2O54785 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Mir877-201ENSMUST00000104738 85 ntBASIC13□□□□□ -0.33
Limk2O54785 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13□□□□□ -0.33
Limk2O54785 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13□□□□□ -0.33
Limk2O54785 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13□□□□□ -0.33
Limk2O54785 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limk2O54785 Gm23363-201ENSMUST00000175024 79 ntBASIC13□□□□□ -0.33
Limk2O54785 Gm29199-201ENSMUST00000187766 775 ntBASIC13□□□□□ -0.33
Limk2O54785 Gm5850-201ENSMUST00000192923 1206 ntBASIC13□□□□□ -0.33
Limk2O54785 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms