Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trove2O08848 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trove2O08848 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trove2O08848 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trove2O08848 Gm45841-201ENSMUST00000207700 164 ntBASIC13.2□□□□□ -0.3
Trove2O08848 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.2□□□□□ -0.3
Trove2O08848 Gm9797-201ENSMUST00000052902 613 ntBASIC13.2□□□□□ -0.3
Trove2O08848 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trove2O08848 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trove2O08848 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.2□□□□□ -0.3
Trove2O08848 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trove2O08848 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trove2O08848 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trove2O08848 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.19□□□□□ -0.3
Trove2O08848 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.19□□□□□ -0.3
Trove2O08848 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.19□□□□□ -0.3
Trove2O08848 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.19□□□□□ -0.3
Trove2O08848 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.19□□□□□ -0.3
Trove2O08848 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Gm21854-201ENSMUST00000179901 471 ntBASIC13.19□□□□□ -0.3
Trove2O08848 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.19□□□□□ -0.3
Trove2O08848 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.19□□□□□ -0.3
Trove2O08848 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trove2O08848 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.19□□□□□ -0.3
Trove2O08848 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trove2O08848 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trove2O08848 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.19□□□□□ -0.3
Trove2O08848 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trove2O08848 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trove2O08848 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trove2O08848 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
Trove2O08848 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Syt7-204ENSMUST00000223586 1344 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trove2O08848 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.18□□□□□ -0.3
Trove2O08848 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.18□□□□□ -0.3
Trove2O08848 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.18□□□□□ -0.3
Trove2O08848 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.18□□□□□ -0.3
Trove2O08848 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.18□□□□□ -0.3
Trove2O08848 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trove2O08848 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms