Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.34□□□□□ -0.27
Ebf3O08791 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.34□□□□□ -0.27
Ebf3O08791 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf3O08791 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf3O08791 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf3O08791 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf3O08791 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.33□□□□□ -0.28
Ebf3O08791 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ebf3O08791 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm2383-201ENSMUST00000181461 807 ntBASIC13.33□□□□□ -0.28
Ebf3O08791 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.33□□□□□ -0.28
Ebf3O08791 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf3O08791 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.33□□□□□ -0.28
Ebf3O08791 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.33□□□□□ -0.28
Ebf3O08791 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ebf3O08791 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.33□□□□□ -0.28
Ebf3O08791 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ebf3O08791 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ebf3O08791 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.33□□□□□ -0.28
Ebf3O08791 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf3O08791 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gm11964-201ENSMUST00000120982 444 ntBASIC13.32□□□□□ -0.28
Ebf3O08791 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gm11978-201ENSMUST00000122315 466 ntBASIC13.32□□□□□ -0.28
Ebf3O08791 Gm13316-201ENSMUST00000140537 691 ntBASIC13.32□□□□□ -0.28
Ebf3O08791 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.32□□□□□ -0.28
Ebf3O08791 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Ebf3O08791 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.32□□□□□ -0.28
Ebf3O08791 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ebf3O08791 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ebf3O08791 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.32□□□□□ -0.28
Ebf3O08791 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms