Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Dctn1O08788 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Dctn1O08788 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Dctn1O08788 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.79■□□□□ 0.12
Dctn1O08788 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Gm13996-201ENSMUST00000118456 430 ntBASIC15.79■□□□□ 0.12
Dctn1O08788 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.79■□□□□ 0.12
Dctn1O08788 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Dctn1O08788 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.79■□□□□ 0.12
Dctn1O08788 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Dctn1O08788 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Dctn1O08788 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm24845-201ENSMUST00000158034 109 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm8018-201ENSMUST00000173536 789 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.78■□□□□ 0.12
Dctn1O08788 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm42997-202ENSMUST00000200321 985 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm44651-201ENSMUST00000207343 372 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Gzmn-202ENSMUST00000225535 989 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.78■□□□□ 0.12
Dctn1O08788 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Dctn1O08788 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.78■□□□□ 0.12
Dctn1O08788 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Dctn1O08788 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Dctn1O08788 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms