Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm3727J3QM54 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.87□□□□□ -0.67
Gm3727J3QM54 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Mir8117-201ENSMUST00000184773 107 ntBASIC10.87□□□□□ -0.67
Gm3727J3QM54 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.87□□□□□ -0.67
Gm3727J3QM54 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.87□□□□□ -0.67
Gm3727J3QM54 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm3727J3QM54 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm24543-201ENSMUST00000103867 82 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm9630-201ENSMUST00000178304 885 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm2651-201ENSMUST00000203560 838 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms