Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Gm9132-201ENSMUST00000210182 832 ntBASIC17.43■□□□□ 0.38
Tubgcp6G5E8P0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.43■□□□□ 0.38
Tubgcp6G5E8P0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp6G5E8P0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp6G5E8P0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Tubgcp6G5E8P0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm23596-201ENSMUST00000104304 132 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm15703-201ENSMUST00000120250 880 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm6905-201ENSMUST00000205729 511 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm9111-201ENSMUST00000219394 709 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Gm807-202ENSMUST00000224929 408 ntBASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp6G5E8P0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Mir671-201ENSMUST00000102432 98 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Gm23771-201ENSMUST00000178702 110 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Gm9996-201ENSMUST00000070359 913 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp6G5E8P0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 AC159376.1-201ENSMUST00000218504 630 ntBASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Mir483-201ENSMUST00000093631 73 ntBASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gm22133-201ENSMUST00000102082 109 ntBASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Mir8115-201ENSMUST00000184992 119 ntBASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp6G5E8P0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tubgcp6G5E8P0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Tubgcp6G5E8P0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tubgcp6G5E8P0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp6G5E8P0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp6G5E8P0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tubgcp6G5E8P0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp6G5E8P0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp6G5E8P0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms