Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 AC133602.1-201ENSMUST00000227510 509 ntBASIC19.08■□□□□ 0.65
Pcf11G3X9Z4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC19.08■□□□□ 0.64
Pcf11G3X9Z4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcf11G3X9Z4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcf11G3X9Z4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcf11G3X9Z4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm22133-201ENSMUST00000102082 109 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm12501-201ENSMUST00000119163 529 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm18038-201ENSMUST00000197900 485 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm5051-201ENSMUST00000204085 485 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm7722-201ENSMUST00000120646 741 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 CT571245.2-201ENSMUST00000218421 305 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Gm28719-201ENSMUST00000187779 1757 ntBASIC19.06■□□□□ 0.64
Pcf11G3X9Z4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcf11G3X9Z4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcf11G3X9Z4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms