Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim55G3X8Y1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.16□□□□□ -0.3
Trim55G3X8Y1 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.16□□□□□ -0.3
Trim55G3X8Y1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim55G3X8Y1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim55G3X8Y1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim55G3X8Y1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm15678-201ENSMUST00000117573 960 ntBASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms