Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.42■□□□□ 0.06
NpcdF8VQB8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NpcdF8VQB8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gm15432-201ENSMUST00000121106 195 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gzmn-202ENSMUST00000225535 989 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.41■□□□□ 0.06
NpcdF8VQB8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
NpcdF8VQB8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm11450-201ENSMUST00000121144 333 ntBASIC15.4■□□□□ 0.06
NpcdF8VQB8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm6963-201ENSMUST00000147879 379 ntBASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm29155-201ENSMUST00000185910 269 ntBASIC15.4■□□□□ 0.06
NpcdF8VQB8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.4■□□□□ 0.06
NpcdF8VQB8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NpcdF8VQB8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NpcdF8VQB8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm12015-201ENSMUST00000117065 843 ntBASIC15.39■□□□□ 0.05
NpcdF8VQB8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm12029-201ENSMUST00000120073 832 ntBASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm19353-201ENSMUST00000184561 445 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms