Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm13296-201ENSMUST00000117854 997 ntBASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.36■□□□□ 0.05
Ube4aE9Q735 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm19208-201ENSMUST00000213861 912 ntBASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4aE9Q735 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.35■□□□□ 0.05
Ube4aE9Q735 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm12217-201ENSMUST00000118858 696 ntBASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm45224-201ENSMUST00000208203 414 ntBASIC15.35■□□□□ 0.05
Ube4aE9Q735 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm8913-201ENSMUST00000209491 641 ntBASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4aE9Q735 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Rmrp-201ENSMUST00000157463 271 ntBASIC15.34■□□□□ 0.05
Ube4aE9Q735 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Gm43138-201ENSMUST00000199123 708 ntBASIC15.34■□□□□ 0.05
Ube4aE9Q735 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.34■□□□□ 0.05
Ube4aE9Q735 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.34■□□□□ 0.05
Ube4aE9Q735 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4aE9Q735 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4aE9Q735 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Gm14644-201ENSMUST00000116671 647 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms