Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm15626-201ENSMUST00000117478 868 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm22379-201ENSMUST00000157480 131 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Gm5190-201ENSMUST00000192434 357 ntBASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col6a3E9PWQ3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm16210-201ENSMUST00000122161 610 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm14892-201ENSMUST00000117636 267 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm15617-201ENSMUST00000118973 771 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a3E9PWQ3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm14807-201ENSMUST00000116640 983 ntBASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a3E9PWQ3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a3E9PWQ3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms