Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Gm12857-201ENSMUST00000117678 592 ntBASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Rn7s6-201ENSMUST00000175005 291 ntBASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hfm1D3Z4R1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hfm1D3Z4R1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hfm1D3Z4R1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hfm1D3Z4R1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hfm1D3Z4R1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Gm26286-201ENSMUST00000104166 134 ntBASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Gm2517-201ENSMUST00000215651 348 ntBASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hfm1D3Z4R1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm10731-201ENSMUST00000181171 448 ntBASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm44980-201ENSMUST00000205826 314 ntBASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hfm1D3Z4R1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms