Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm11618-201ENSMUST00000117946 267 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm8062-201ENSMUST00000139696 444 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm37922-201ENSMUST00000195596 455 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm6007-201ENSMUST00000208170 823 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.51□□□□□ -0.41
Clip3B9EHT4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clip3B9EHT4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Gm1335-201ENSMUST00000121653 386 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Snora78-201ENSMUST00000158630 128 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 Gm17420-201ENSMUST00000164753 153 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.5□□□□□ -0.41
Clip3B9EHT4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clip3B9EHT4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.49□□□□□ -0.41
Clip3B9EHT4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.49□□□□□ -0.41
Clip3B9EHT4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms