Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm7063-201ENSMUST00000186840 981 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm42550-201ENSMUST00000201553 960 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm44882-201ENSMUST00000205702 802 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.22□□□□□ -0.13
Brpf3B2KF05 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.22□□□□□ -0.13
Brpf3B2KF05 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.21□□□□□ -0.13
Brpf3B2KF05 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.21□□□□□ -0.13
Brpf3B2KF05 Gm8396-201ENSMUST00000057361 823 ntBASIC14.21□□□□□ -0.13
Brpf3B2KF05 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brpf3B2KF05 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brpf3B2KF05 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.2□□□□□ -0.14
Brpf3B2KF05 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.2□□□□□ -0.14
Brpf3B2KF05 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.2□□□□□ -0.14
Brpf3B2KF05 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Brpf3B2KF05 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms