Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Gm11246-201ENSMUST00000120880 345 ntBASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Rprl1-201ENSMUST00000158050 327 ntBASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Gm18893-201ENSMUST00000198416 943 ntBASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Gm10288-201ENSMUST00000084614 537 ntBASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col4a6B1AVK5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm5419-201ENSMUST00000119301 527 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Mir7076-201ENSMUST00000183519 74 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm43520-201ENSMUST00000197996 164 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm9797-202ENSMUST00000218003 294 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Snora73b-201ENSMUST00000083419 205 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.91□□□□□ -0.34
Col4a6B1AVK5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm11511-201ENSMUST00000118146 540 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm11675-201ENSMUST00000121873 832 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm26035-201ENSMUST00000083065 308 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col4a6B1AVK5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms