Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm25214-201ENSMUST00000104573 129 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm14109-201ENSMUST00000118814 309 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.55□□□□□ -0.4
Chd3B1AR17 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm20482-202ENSMUST00000174729 825 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm27320-201ENSMUST00000184892 109 ntBASIC12.55□□□□□ -0.4
Chd3B1AR17 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chd3B1AR17 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd3B1AR17 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm16296-201ENSMUST00000159905 325 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm4857-201ENSMUST00000192718 785 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 Morn2-202ENSMUST00000227729 656 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.54□□□□□ -0.4
Chd3B1AR17 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.54□□□□□ -0.4
Chd3B1AR17 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chd3B1AR17 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.53□□□□□ -0.4
Chd3B1AR17 Gm15808-201ENSMUST00000119046 604 ntBASIC12.53□□□□□ -0.4
Chd3B1AR17 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.53□□□□□ -0.4
Chd3B1AR17 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.53□□□□□ -0.4
Chd3B1AR17 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chd3B1AR17 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chd3B1AR17 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms